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Application of Caenorhabditis elegans (nematode) and Danio rerio embryo (zebrafish) as model systems to screen for developmental and reproductive toxicity of Piperazine compounds

From the article: "To enable selection of novel chemicals for new processes, there is a recognized need for alternative toxicity screening assays to assess potential risks to man and the environment. For human health hazard assessment these screening assays need to be translational to humans, have high throughput capability, and from an animal welfare perspective be harmonized with the principles of the 3Rs (Reduction, Refinement, Replacement). In the area of toxicology a number of cell culture systems are available but while these have some predictive value, they are not ideally suited for the prediction of developmental and reproductive toxicology (DART). This is because they often lack biotransformation capacity, multicellular or multi- organ complexity, for example, the hypothalamus pituitary gonad (HPG) axis and the complete life cycle of whole organisms. To try to overcome some of these limitations in this study, we have used Caenorhabditis elegans (nematode) and Danio rerio embryos (zebrafish) as alternative assays for DART hazard assessment of some candidate chemicals being considered for a new commercial application. Nematodes exposed to Piperazine and one of the analogs tested showed a slight delay in development compared to untreated animals but only at high concentrations and with Piperazine as the most sensitive compound. Total brood size of the nematodes was also reduced primarily by Piperazine and one of the analogs. In zebrafish Piperazine and analogs showed developmental delays. Malformations and mortality in individual fish were also scored. Significant malformations were most sensitively identified with Piperazine, significant mortality was only observed in Piperazine and only at the higest dose. Thus, Piperazine seemed the most toxic compound for both nematodes and zebrafish. The results of the nematode and zebrafish studies were in alignment with data obtained from conventional mammalian toxicity studies indicating that these have potential as developmental toxicity screening systems. The results of these studies also provided reassurance that none of the Piperazines tested are likely to have any significant developmental and/or reproductive toxicity issues to humans when used in their commercial applications."

Modelling the interaction between potato crops and cyst nematodes

Analyses of the effects of potato cyst nematodes (Globodera pallida) on growth, physiology and yield of potato cultivars in field plots at three levels of soil compaction

Field experiments were carried out in 1991 and 1992 on sandy soil highly infested with the potato cyst nematode Globodera pallida. Half the trial area was fumigated with nematicide to establish two levels of nematode density. Three levels of soil compaction were made by different combinations of artificial compaction and rotary cultivation. Two potato cultivars were used in 1991 and four in 1992. Both high nematode density and soil compaction caused severe yield losses, of all cultivars except cv. Elles which was tolerant of nematode attack. The effects of the two stress factors were generally additive. Analysis of the yield loss showed that nematodes mainly reduced cumulative interception of light while compaction mainly reduced the efficiency with which intercepted light was used to produce biomass. This indicates that nematodes and compaction affect growth via different damage mechanisms. Nematodes reduced light interception by accelerating leaf senescence, by decreasing the specific leaf area and indirectly by reducing overall crop growth rate. Partitioning of biomass between leaves, stems and tubers was not affected by nematode infestation but compaction decreased partitioning to leaves early in the growing season while increasing it during later growth stages. The effects of nematodes and compaction on root length dynamics and nutrient uptake were also additive. This suggests that the commonly observed variation in yield loss caused by nematodes on different soil types is not related to differences in root system expansion between soils of various strength. Cv. Elles, which showed tolerance of nematodes by relatively low yield losses in both experiments, was characterised by high root length density and thick roots. These characteristics did not confer tolerance of soil compaction, since compaction affected root lengths and tuber yields equally in all cultivars. In the first experiment only, high nematode density led to decreased root lengths and lower plant nutrient concentrations. The yield loss which occurred in the second experiment was attributed to the effects of nematodes on other aspects of plant physiology. Copyright © 1995, Wiley Blackwell. All rights reserved

DARTpaths, an in silico platform to investigate molecular mechanisms of compounds

Summary: Xpaths is a collection of algorithms that allow for the prediction of compound-induced molecular mechanisms of action by integrating phenotypic endpoints of different species; and proposes follow-up tests for model organisms to validate these pathway predictions. The Xpaths algorithms are applied to predict developmental and reproductive toxicity (DART) and implemented into an in silico platform, called DARTpaths.

Advantages of lupinus mutabilis

MultipleXLab: A high-throughput portable live-imaging root phenotyping platform using deep learning and computer vision.